Sunday 6 May 2012

NUR'AIN BINTI ZULKEFLI - 111399

LAB 5- DETERMINATION OF ANTIMICROBIAL EFFECT OF MICROBIAL EXTRACTS



Introduction


    Certain  group of bacteria can produce antimicbial substances with the capacity to inhibit the growth of pathogenic and spoilage micro-organisms. Organic acids, hydrogen peroxide, diacetyl and bacteriocins are included among these antimicrobial compounds. Interest in naturally produced antimicrobial agents such as bacteriocins, is on the rise, since nowadays consumers demand "natural" and "minimally processed" food.
     Bacteriocins comprise a large and diverse group of ribosomally synthesised antimicrobial proteins  or peptides. Although bacteriocins can be found in numerous Gram-positive  and Gram-negative bacteria, those produced by lactic acid bacteria (LAB) have receive special attention in recent years due to their potential application in the food industry as natural biopreservatives. Different classes of LAB bacteriocins have been identified on the basis of biochemical and genetic characterization. These bacteriocins have been reported to inhibit the growth of Listeria monocytogenes, Staphylococcus aureus, Enterococcus faecalis and Clostridium tyrobutyricum.

 Part 1- Determination of bacteriocin activity via agar diffusion test.


    Kirby-Bauer disk-diffusion method is the method of measuring the effect of an animicrobial agent against bacteria grown in culture. A known quantity of bacteria are grown  on agar plates in the presence of thin wafers containing relevant antibiotics. If the bacteria are susceptible to a particular antibiotic, an area of clearing surrounds the wafer where bacteria are not capable of growing.
  


Part 2- Determination of bacteriocin activity via optical density.


     Optical density, measured in a spectrophotometer, can be used as a measure of the concentration of bacteria in a suspension.. As visible light passes through cell suspension the light is scattered. Greater scatter indicates that more bacteria or other material is present.The amount of light scatter can be measured in a spectrophotometer. Typically the  OD600 is used in the experiment.
   

Objective

  To determine the antimicrobial effect of extracellular extracts of selected LAB strains.
Results


Part 1- Determination of bacteriocin activity via agar diffusion test


Calculations 


Inhibition zone :



Serial dilutions of extracellular extract




Y axis: Abs600 or OD600                                X axis: Serial dilutions of extracellular extract
m and c: Constants
One arbitrary unit (AU) is defined as the dilution factor of the extracellular extract that inhibited 50% of the spoilage / pathogenic bacteria growth and expressed as AU/ml
Control : Abs600 = Z. Thus, 50% of Z = Z/2
Y = mx + c. Therefore, x = (Y – c)/m
When Y = Z/2, thus, x= (Z /2-c)

Strains of LAB
Strains of spoilage/pathogenic bacteria
Inhibition zone (cm)
Lp
Kp
0.7
Sa
-
Pa
0.6
Lb
Kp
0.7
Sa
-
Pa
0.8
Lc
Kp
0.6
Sa
-
Pa
0.7


Strain of LAB
Strains of spoilage/pathogenic bacteria
Inhibition zone (cm)
LAB species
Sa
-
Kp
1.0
Pa
1.05


Part 2- Determination of bacteriocin activity via optical density


Serial dilution of extracellular extract

Dilutions
OD600 of spoilage/pathogenic bacteria
Strain 1:Sa

Strain 2:Kp
Strain 3:Pa
0x
-
-
-
2x
0.735
0.637
0.710
10x
1.032
0.691
0.076
50x
0.621
0.641
0.804
100x
0.502
0.765
0.528
Equation
y=-0.111x + 1.0
y=0.033x + 0.6
y=0.018x + 0.484
OD600 of control
0.270
0.829
0.432
50% of OD600
0.135
0.415

0.216


AU/mL
7.793
5.606

14.889


Sa
Dilutions
Abstract
0x
0.000
2
0.735
10x
1.032
50x
0.621
100x
0.502

               
Kp
Dilution
Abstract
0x
0
10x
0.637
20x
0.691
50x
0.641
100x
0.765
               
Pa
Dilutions
Abstract
0x
0
10x
0.710
20x
0.076
50x
0.804
100x
0.528





Discussion


Part 1


   Bacteriocins are antimicrobial peptides or proteins produced by lactic acid bacteria (LAB).Diameters of inhibition zones produced in plates by the various test-microorganisms exposed to equal nisin concentrations showed wide variation. The lactic acid bacteria (LAB) comprise a clade of Gram-positive, low-GC, acid-tolerant, generally non-sporulating, non-respiring rod or cocci that are associated by their common metabolic and physiological characteristics. These bacteria, usually found in decomposing plants and lactic products, produce lactic acid as the major metabolic end-product of carbohydratefermentation. This trait has, throughout history, linked LAB with food fermentations, as acidification inhibits the growth of spoilage agents. Proteinaceous bacteriocins are produced by several LAB strains and provide an additional hurdle for spoilage and pathogenic microorganisms. Furthermore, lactic acid and other metabolic products contribute to the organoleptic and textural profile of a food item. The industrial importance of the LAB is further evinced by their generally recognized as safe (GRAS) status, due to their ubiquitous appearance in food and their contribution to the healthy microflora of human mucosal surfaces. The genera that comprise the LAB are at its core LactobacillusLeuconostocPediococcusLactococcus, andStreptococcus as well as the more peripheral AerococcusCarnobacteriumEnterococcusOenococcusSporolactobacillusTetragenococcusVagococcus, and Weisella; these belong to the order Lactobacillales. The extract of LAB give zone of inhibition into the indicator pathogen strains tested. Nutrient that mixed with phatogenic bacteria and Lab extract is place on it, Then it is incubate for 24 to 48 hours at 37 degree celcius. The diameter of inhibition theen is measured in cm. The size of inhibition indicate the difference of bacteriocin activity between LAB.





Part 2

During this experiment, we use spectrophotometer to measure the concentration of bacteria in suspension.  Light entering a cloudy solution will be absorbed.  A clear solution will allow almost all of the light through.  The amount of absorbance can be determined by using a spectrophotometer, which measures what fraction of the light passes through a given solution and indicates on the absorbance display the amount of light absorbed compared to that absorbed by a clear solution.  Inside, a light shines through a filter (which can be adjusted by controlling the wavelength of light), then through the sample and onto a light-sensitive phototube.This produces an electrical current.The absorbance meter measures how much light has been blocked by the sample and thereby prevented from striking the phototube.  A clear tube of water or other clear solution is the BLANK and has zero absorbance.  The amount of substance in the solution is directly proportional to the absorbance reading.  A graph of absorbance vs. concentration will produce a straight line.Optical density extracellular extract of LAB contained MRS medium and pathogenic microorganism was detemined with spectrophotometer 600 nm. One type of LAB used in thie experiment is Lactobacillus plantirum. Three types of pathogenic microorganisms have been used are S.aureus, P.aeruginosa, and K.pneumonia.Negative-control is prepared for auto-zero via spectrophotometer while positive-control which show higher optical density than the other sample show atimicrobial effect.  


Conclusion
    In the conclusion,  Lactic acid bacteria (LAB) in fermented foods produce a large variety of compounds which give these products their characteristic flavor and color apart from improving its safety and quality. Bacteriocins are categorized in several ways, including producing strain, common resistance mechanisms, and mechanism of killing. There are several large categories of bacteriocin which are only phenomenologically related. These include the bacteriocins from gram-positive bacteria, the colicins, the microcins, and the bacteriocins from Archaea. The bacteriocins from E. coli are called colicins (formerly called 'colicines,' meaning 'coli killers'). They are the longest studied bacteriocins. They are a diverse group of bacteriocins and do not include all the bacteriocins produced by E. coli.



Reference